Book Direct Here
and save up to 10%
Compared to Booking.com
Check rooms and rates
From123US$ /night
Check-in
25Feb2026Select date
Check-out
26Feb2026Select date
Rooms and Guests2 Guests, 1 Room
Key details

Hotel Overview

5005 N Harbor Drive, San Diego, California, United States, 92106-2307
-
Near the harbor
Great
8.0
8.3
/10
3.9
3.8
/5

Best Western Yacht Harbor Hotel offers newly refurbished guest rooms and convenient access to nearby attractions. This 3-star San Diego hotel features a heated pool, complimentary breakfast, and modern amenities, making it suitable for both vacation and business trips.

Rooms & Amenities

Rooms at Best Western Yacht Harbor Hotel feature modern décor, mini-refrigerators, microwaves, and flat-screen TVs. Many rooms include private balconies with views of the harbor or pool. Guests can also take advantage of complimentary wireless internet access and thermostat heating and cooling.

Dining Options

The hotel provides a complimentary buffet breakfast, including hot dishes such as eggs. Within walking distance, various restaurants offer seafood and Italian cuisine. Notable dining options are Pizza Nova and Point Loma Cafe, both known for their bay view and casual atmosphere.

Leisure & Activities

Leisure activities include a heated pool and access to jet skiing and kayaking at nearby locations. The hotel is also close to the Gaslamp District, where guests can enjoy nightlife and entertainment. Outdoor activities are easily accessible, with the San Diego Harbor and nearby tide pools available for exploration.

Transportation & Accessibility

Best Western Yacht Harbor Hotel is conveniently located minutes from San Diego International Airport and has easy access to bus services. Visitors can reach attractions like SeaWorld and the USS Midway Museum within 4.5 miles. The hotel offers accessible features, including accessible parking and routes to public spaces.

Must-do experiences

  • Savor fish tacos at Oscar's Mexican Seafood on Mission Blvd.
  • Take a scenic walk at Sunset Cliffs for stunning ocean views.
  • Visit the Maritime Museum for a deep dive into San Diego's history.
  • Explore Little Italy's Mercato Farmers' Market on Saturdays.
  • Enjoy a harbor cruise for a unique view of the San Diego skyline.
View all

Pick the Room That Suits Your Travel Needs

Rooms for singles, families, or groups—many with breakfast, free cancellation, and exclusive airport packages
King Room Hillside View Non-Smoking
2 persons
230 sq. feet 
1 King-size bed
Balcony
King Room Balcony City View
2 persons
270 sq. feet 
1 King-size bed
Balcony
Queen Room Two Queen Beds Balcony City View
2 persons
270 sq. feet 
2 King Size Beds
Balcony
King Room Hillside View Smoking
2 persons
230 sq. feet 
1 King-size bed
Balcony
Click button to see more rooms
Show all rooms
Show all roomsLess

View Room Rates & Availability by Date

Check rooms and compare prices for your travel dates today

Facilities

Comfortable Rooms and Convenient Services to Enhance Your Layover
Facilities: Very good
7.8/10Review score

General

  • Non-smoking rooms
  • Wi-Fi
  • Parking
  • Safe deposit box
  • 24-hour reception
  • No pets allowed
  • Rooms/ Facilities for disabled
  • Lift
  • Vending machines
  • Smoke detectors
  • Fire extinguishers

Sports & Fitness

  • Wind surfing
  • Diving
  • Snorkelling
  • Hiking
  • Golf course
  • Fishing

Services

  • Car hire

Business

  • Fax/Photocopying

Children

  • Children's menu

Spa & Leisure

  • Outdoor swimming pool
  • Jacuzzi

Room features

  • Air conditioning
  • Heating
  • Tea and coffee facilities
  • Ironing facilities
Show more

Location & Directions

5005 N Harbor Drive, San Diego, California, United States, 92106-2307
Map view
5005 N Harbor Drive, San Diego, California, United States, 92106-2307
Nearby
Sportfishing Legacy
1000 ft
Captain Bill Poole et al
1000 ft
1403 Scott St
Point Loma Sportfishing
1200 ft
Woodbury University
1500 ft
Moment Cycle Shop
1600 ft
Restaurants
Winchells
900 ft
1501 Rosecrans St
Eat Mexican Food
1300 ft
1578 Rosecrans St
Galley H & M Landing
1900 ft
2803 Emerson St
Northside Shack
2100 ft
1255 Rosecrans St Point Loma
Cecilia's Taqueria
2900 ft
2820 Historic Decatur Rd
Adalberto's Mexican Food
2900 ft
1868 Rosecrans St
Marvelous Muffins
5000 ft
2907 Shelter Island Dr Ste 101
Pacific Coast Chinese Food
2400 ft
2907 Shelter Island Dr
Explore San Diego
Explore Nearby Attractions
Top Attractions
Activities
Dining
Entertainment
USS Midway Museum
USS Midway Museum
50 minutes' walk
Aircraft carrier turned museum featuring WWII artifacts and flight simulators, offering a unique naval history experience.
SeaWorld San Diego
SeaWorld San Diego
45 minutes' walk
Marine park with thrilling rides, animal exhibits, and entertaining shows featuring dolphins and orcas, great for families.
Old Town San Diego State Historic Park
Old Town San Diego State Historic Park
45 minutes' walk
Living history park showcasing California's early days with shops, restaurants, and cultural celebrations.
Spanish Landing Park
Spanish Landing Park
30 minutes' walk
Scenic waterfront park with picnic areas and walking trails, perfect for leisurely afternoons by the bay.
Sportfishing
4 minutes' walk
Catch local fish with guided boat services, perfect for fishing enthusiasts looking for an adventure on the water.
Yoga Classes by the Bay
5 minutes' drive
Relaxing yoga sessions with soothing bay views, ideal for unwinding. Classes available year-round.
Winchells
Winchells
3 minutes' walk
Casual donut and coffee shop offering a variety of pastries, perfect for a quick treat any time of day.
Galley H & M Landing
Galley H & M Landing
7 minutes' walk
Popular seafood spot known for fresh fish tacos and ocean views, combining casual dining with local flavors.
Humphreys Concerts by the Bay
20 minutes' walk
Outdoor venue featuring live music across various genres, renowned for its sunset views and vibrant atmosphere.
Humphreys Backstage Live
19 minutes' walk
Intimate venue hosting local artists and tribute bands, offering a cozy setting for a night of fun and music.
How to Navigate the City
City Centre
San Diego10 min  ·  3.9 mi
Airports
San Diego International Airport (SAN)8 min  ·  3.1 mi
El Cajon (CJN)49 min  ·  20.0 mi
Train
Coaster Old Town Station7 min  ·  2.5 mi
San Diego Old Town Transportation Center7 min  ·  2.5 mi
Bus
Bus stop4 min  ·  1000 ft
Interested in Early Bird Booking Discounts?
Unlock Special Airport Rates Instantly
Check Rates
Property information and rules
Check-in
from 15:00-23:59
Check-out
until 12 pm
Guest Parking
Private parking is possible on site for free.
Internet
is available in for free.
Breakfast
All visitors are offered a american breakfast for a fee. 
Children & extra beds
There are no cots provided in a room. 
Pets
Pets are not allowed.
Year renovated:
2008
Number of floors:
6
Number of rooms:
105

Real Guest Reviews & Ratings

What Previous Guests Had to Say
Review score
Based on 2029 verified reviews
7.9/10
Very good
78%
Recommend
Breakfast
7.6/10
Cleanliness
8.1/10
Comfort
8.2/10
Facilities
7.8/10
Free Wi-Fi
8.3/10
Location
8.6/10
Paid Wi-Fi
6.9/10
Staff
8.2/10
Value for money
7.9/10
Pros
Clean rooms
Comfy bed
Good location
Cons
Older building
Difficult shower
Guest reviews
based on 4359 reviews
8.0/10
No reviews yet on our siteUnfortunately, our guests have not yet left any reviews for this hotel, but you can read reviews from Booking.com.
Open reviews
Questions of the users
About Best Western Yacht Harbor Hotel
What amount is required for the deposit when booking a stay?
22 March 2024
A preauthorization for the room and tax will typically be placed on your credit card, with final payment processed at check-out. If paying with cash, a $50 hold on a credit or debit card is required.
Is a shuttle service available from the airport and to the cruise terminal?
15 June 2024
Yes, a shuttle service is available for airport pick-ups between 07:00 and 17:00, and it also provides drop-offs at the cruise terminal.
Can I swim in the pool during my stay?
03 July 2024
Yes, the pool is open for guests to enjoy.
Do the guest rooms come equipped with refrigerators?
10 August 2024
Yes, all rooms include mini-refrigerators, although they do not have freezers.
How far is the hotel from the San Diego Zoo?
01 October 2024
The hotel is located approximately 8 kilometers from the San Diego Zoo.
Is it allowed to take breakfast to go?
18 November 2024
Certainly, guests can take breakfast items to go.
What dining options are available near the hotel?
22 December 2024
There are several restaurants located across the street and more within a 5-kilometer radius.
Is there a microwave available in the hotel rooms?
17 February 2025
Yes, each room is equipped with a microwave for guest use.
Can I check in early, around midday?
05 March 2025
Early check-in is possible but is subject to availability.
Are there designated smoking rooms available?
18 April 2025
Smoking rooms are available but only with king-sized beds offering harbor views.
Is there parking available for guests staying at the hotel?
29 May 2025
Parking is available for guests staying at the hotel, and it is complimentary for up to 7 nights with a reservation.

Next best alternative

Consider them for your next trip.
Check-in
25Feb2026Select date
Check-out
26Feb2026Select date
Rooms and Guests2 Guests, 1 Room
Need more options?
Check Top hotels near Best Western Yacht Harbor Hotel
Doubletree By Hilton San Diego Bayside Exterior photo
Mobile-only price

Doubletree By Hilton San Diego Bayside

8.0
Great366 reviews
180m from property
USD 99USD 89
per night
Comfort Inn San Diego Airport At The Harbor Skyline photo
Mobile-only price

Comfort Inn San Diego Airport At The Harbor

7.1
Very good167 reviews
197m from property
USD 117USD 105
per night
Hotel Aqua Mar San Diego Exterior photo
Mobile-only price

Hotel Aqua Mar San Diego

6.9
Nice550 reviews
255m from property
USD 66USD 59
per night